pkgsrc-Changes-HG archive
[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index][Old Index]
[pkgsrc/trunk]: pkgsrc Change MAINTAINER= to OWNER= on mission-critical packages
details: https://anonhg.NetBSD.org/pkgsrc/rev/3f40f1a14194
branches: trunk
changeset: 390743:3f40f1a14194
user: bacon <bacon%pkgsrc.org@localhost>
date: Wed Dec 28 15:27:15 2022 +0000
description:
Change MAINTAINER= to OWNER= on mission-critical packages
diffstat:
biology/ad2vcf/Makefile | 4 ++--
biology/bcftools/Makefile | 4 ++--
biology/biolibc-tools/Makefile | 4 ++--
biology/biolibc/Makefile | 4 ++--
biology/bowtie2/Makefile | 4 ++--
biology/bwa/Makefile | 4 ++--
biology/fasda/Makefile | 4 ++--
biology/fastq-trim/Makefile | 4 ++--
biology/generand/Makefile | 4 ++--
biology/hisat2/Makefile | 4 ++--
biology/htslib/Makefile | 4 ++--
biology/kallisto/Makefile | 4 ++--
biology/peak-classifier/Makefile | 4 ++--
biology/rna-seq/Makefile | 4 ++--
biology/samtools/Makefile | 4 ++--
biology/vcf-split/Makefile | 4 ++--
biology/vcf2hap/Makefile | 4 ++--
devel/libxtend/Makefile | 4 ++--
math/basic-stats/Makefile | 4 ++--
sysutils/auto-admin/Makefile | 4 ++--
20 files changed, 40 insertions(+), 40 deletions(-)
diffs (truncated from 336 to 300 lines):
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/ad2vcf/Makefile
--- a/biology/ad2vcf/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/ad2vcf/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.6 2022/06/11 19:48:32 bacon Exp $
+# $NetBSD: Makefile,v 1.7 2022/12/28 15:27:15 bacon Exp $
DISTNAME= ad2vcf-0.1.6
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/ad2vcf
COMMENT= Add allelic depth info from a SAM stream to a VCF file
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/bcftools/Makefile
--- a/biology/bcftools/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/bcftools/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.15 2022/06/30 11:18:04 nia Exp $
+# $NetBSD: Makefile,v 1.16 2022/12/28 15:27:15 bacon Exp $
DISTNAME= bcftools-1.15
PKGREVISION= 2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://www.htslib.org/
COMMENT= Tools for manipulating BCF and VCF variant call files
LICENSE= mit
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/biolibc-tools/Makefile
--- a/biology/biolibc-tools/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/biolibc-tools/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.6 2022/12/14 00:23:19 bacon Exp $
+# $NetBSD: Makefile,v 1.7 2022/12/28 15:27:16 bacon Exp $
DISTNAME= biolibc-tools-0.1.4.1
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
GITHUB_TAG= 01886a9b8b0532b555f113dba334812735af1361
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/biolibc-tools
COMMENT= High-performance bioinformatics tools based on biolibc
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/biolibc/Makefile
--- a/biology/biolibc/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/biolibc/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.10 2022/12/11 21:14:37 bacon Exp $
+# $NetBSD: Makefile,v 1.11 2022/12/28 15:27:15 bacon Exp $
DISTNAME= biolibc-0.2.4
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/biolibc
COMMENT= Low-level high-performance bioinformatics library
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/bowtie2/Makefile
--- a/biology/bowtie2/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/bowtie2/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.5 2022/06/30 11:18:04 nia Exp $
+# $NetBSD: Makefile,v 1.6 2022/12/28 15:27:16 bacon Exp $
DISTNAME= bowtie2-2.4.4
PKGREVISION= 2
@@ -6,7 +6,7 @@
MASTER_SITES= ${MASTER_SITE_GITHUB:=BenLangmead/}
GITHUB_TAG= v${PKGVERSION_NOREV}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/BenLangmead/bowtie2
COMMENT= Ultrafast, memory-efficient short read aligner
LICENSE= gnu-gpl-v3
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/bwa/Makefile
--- a/biology/bwa/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/bwa/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.14 2022/06/28 11:30:59 wiz Exp $
+# $NetBSD: Makefile,v 1.15 2022/12/28 15:27:16 bacon Exp $
DISTNAME= bwa-0.7.17
CATEGORIES= biology
@@ -6,7 +6,7 @@
GITHUB_TAG= v${PKGVERSION_NOREV}
MASTER_SITES= ${MASTER_SITE_GITHUB:=lh3/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= http://bio-bwa.sourceforge.net/
COMMENT= Map low-divergent sequences against a large reference genome
LICENSE= gnu-gpl-v3
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/fasda/Makefile
--- a/biology/fasda/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/fasda/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.1 2022/12/12 18:28:42 bacon Exp $
+# $NetBSD: Makefile,v 1.2 2022/12/28 15:27:16 bacon Exp $
DISTNAME= fasda-0.1.2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/fasda
COMMENT= Fast and simple differential analysis
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/fastq-trim/Makefile
--- a/biology/fastq-trim/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/fastq-trim/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.2 2022/12/11 21:25:47 bacon Exp $
+# $NetBSD: Makefile,v 1.3 2022/12/28 15:27:16 bacon Exp $
DISTNAME= fastq-trim-0.1.2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=outpaddling/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/outpaddling/Fastq-trim
COMMENT= Lightening fast sequence read trimmer
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/generand/Makefile
--- a/biology/generand/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/generand/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.1 2021/03/21 14:23:46 bacon Exp $
+# $NetBSD: Makefile,v 1.2 2022/12/28 15:27:16 bacon Exp $
DISTNAME= generand-0.1.2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/generand
COMMENT= Generate random genomic data in FASTA/FASTQ, SAM, or VCF format
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/hisat2/Makefile
--- a/biology/hisat2/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/hisat2/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.9 2022/06/30 11:18:04 nia Exp $
+# $NetBSD: Makefile,v 1.10 2022/12/28 15:27:16 bacon Exp $
DISTNAME= hisat2-2.2.1
PKGREVISION= 2
@@ -6,7 +6,7 @@
MASTER_SITES= ${MASTER_SITE_GITHUB:=DaehwanKimLab/}
GITHUB_TAG= v${PKGVERSION_NOREV}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://ccb.jhu.edu/software/hisat2/index.shtml
COMMENT= Alignment program for mapping next-generation sequencing reads
LICENSE= gnu-gpl-v3
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/htslib/Makefile
--- a/biology/htslib/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/htslib/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.29 2022/12/13 10:27:03 adam Exp $
+# $NetBSD: Makefile,v 1.30 2022/12/28 15:27:16 bacon Exp $
DISTNAME= htslib-1.16
CATEGORIES= biology
@@ -6,7 +6,7 @@
GITHUB_RELEASE= ${PKGVERSION_NOREV}
EXTRACT_SUFX= .tar.bz2
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://www.htslib.org/
COMMENT= C library for high-throughput sequencing data formats
LICENSE= mit
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/kallisto/Makefile
--- a/biology/kallisto/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/kallisto/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.4 2022/02/27 01:57:27 bacon Exp $
+# $NetBSD: Makefile,v 1.5 2022/12/28 15:27:17 bacon Exp $
DISTNAME= kallisto-0.48.0
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=pachterlab/}
GITHUB_TAG= v${PKGVERSION_NOREV}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://pachterlab.github.io/kallisto/
COMMENT= Quantify abundances of transcripts from RNA-Seq data
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/peak-classifier/Makefile
--- a/biology/peak-classifier/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/peak-classifier/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.8 2022/12/11 21:16:46 bacon Exp $
+# $NetBSD: Makefile,v 1.9 2022/12/28 15:27:17 bacon Exp $
DISTNAME= peak-classifier-0.1.4.5
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
GITHUB_TAG= a5bcfecdda6e11c9bd24f8171e9162f86209af9d
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/peak-classifier
COMMENT= Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/rna-seq/Makefile
--- a/biology/rna-seq/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/rna-seq/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.1 2022/12/12 18:39:36 bacon Exp $
+# $NetBSD: Makefile,v 1.2 2022/12/28 15:27:17 bacon Exp $
#
DISTNAME= rna-seq-1.0
CATEGORIES= biology meta-pkgs
MASTER_SITES= # empty
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
COMMENT= Core tools needed for RNA-Seq analysis
DEPENDS+= fastq-trim>=0:../../biology/fastq-trim
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/samtools/Makefile
--- a/biology/samtools/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/samtools/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.17 2022/12/13 10:28:01 adam Exp $
+# $NetBSD: Makefile,v 1.18 2022/12/28 15:27:17 bacon Exp $
DISTNAME= samtools-1.16.1
CATEGORIES= biology
@@ -6,7 +6,7 @@
GITHUB_RELEASE= ${PKGVERSION_NOREV}
EXTRACT_SUFX= .tar.bz2
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://www.htslib.org/
COMMENT= Tools for manipulating sequence alignment maps
LICENSE= mit
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/vcf-split/Makefile
--- a/biology/vcf-split/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/vcf-split/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,11 +1,11 @@
-# $NetBSD: Makefile,v 1.7 2022/12/11 21:18:27 bacon Exp $
+# $NetBSD: Makefile,v 1.8 2022/12/28 15:27:17 bacon Exp $
DISTNAME= vcf-split-0.1.5.4
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
GITHUB_TAG= 0a856b934cd483f5c10d93117aab6c7f887204e5
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/vcf-split
COMMENT= Split a multi-sample VCF into single-sample VCFs
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 biology/vcf2hap/Makefile
--- a/biology/vcf2hap/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/biology/vcf2hap/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.6 2022/06/11 19:50:59 bacon Exp $
+# $NetBSD: Makefile,v 1.7 2022/12/28 15:27:17 bacon Exp $
DISTNAME= vcf2hap-0.1.6
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
-MAINTAINER= bacon%NetBSD.org@localhost
+OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/vcf2hap
COMMENT= Generate .hap file from VCF for haplohseq
LICENSE= 2-clause-bsd
diff -r 5a08dc2c610f -r 3f40f1a14194 devel/libxtend/Makefile
--- a/devel/libxtend/Makefile Wed Dec 28 15:20:02 2022 +0000
+++ b/devel/libxtend/Makefile Wed Dec 28 15:27:15 2022 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.9 2022/12/11 21:12:22 bacon Exp $
+# $NetBSD: Makefile,v 1.10 2022/12/28 15:27:17 bacon Exp $
DISTNAME= libxtend-0.1.7
CATEGORIES= devel
MASTER_SITES= ${MASTER_SITE_GITHUB:=outpaddling/}
-MAINTAINER= bacon%NetBSD.org@localhost
Home |
Main Index |
Thread Index |
Old Index