[pkgsrc/trunk]: pkgsrc/biology/phylip Don't depend on hard-coded /usr/X11R6 a...

[joerg <joerg%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/a762680a4bec
branches:  trunk
changeset: 504971:a762680a4bec
user:      joerg <joerg%pkgsrc.org@localhost>
date:      Wed Dec 28 13:46:07 2005 +0000

description:
Don't depend on hard-coded /usr/X11R6 and honor CFLAGS. Bump revision.

diffstat:

 biology/phylip/Makefile         |   8 +++++---
 biology/phylip/distinfo         |   4 ++--
 biology/phylip/patches/patch-aa |  28 +++++++++++++++++++++++-----
 3 files changed, 30 insertions(+), 10 deletions(-)

diffs (81 lines):

diff -r 280b7460d4b3 -r a762680a4bec biology/phylip/Makefile
--- a/biology/phylip/Makefile   Wed Dec 28 13:19:26 2005 +0000
+++ b/biology/phylip/Makefile   Wed Dec 28 13:46:07 2005 +0000
@@ -1,6 +1,7 @@
-# $NetBSD: Makefile,v 1.11 2005/06/16 06:57:40 jlam Exp $
+# $NetBSD: Makefile,v 1.12 2005/12/28 13:46:07 joerg Exp $
 
 DISTNAME=      phylip-3.61
+PKGREVISION=   1
 CATEGORIES=    biology
 MASTER_SITES=  ftp://evolution.genetics.washington.edu/pub/phylip/
 
@@ -16,8 +17,6 @@
 
 INSTALLATION_DIRS=     bin
 
-.include "../../mk/x11.buildlink3.mk"
-
 do-install:
 .for PROGRAM in clique consense contml contrast dnacomp dnadist                \
                dnainvar dnaml dnamlk dnamove dnapars dnapenny          \
@@ -46,4 +45,7 @@
        ${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/doc/${HTML} ${PREFIX}/share/doc/html/phylip
 .endfor
 
+MAKE_ENV+=     X11_LDFLAGS=${X11_LDFLAGS:Q}
+
+.include "../../mk/x11.buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"
diff -r 280b7460d4b3 -r a762680a4bec biology/phylip/distinfo
--- a/biology/phylip/distinfo   Wed Dec 28 13:19:26 2005 +0000
+++ b/biology/phylip/distinfo   Wed Dec 28 13:46:07 2005 +0000
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.4 2005/02/22 21:28:56 agc Exp $
+$NetBSD: distinfo,v 1.5 2005/12/28 13:46:07 joerg Exp $
 
 SHA1 (phylip-3.61.tar.gz) = f852d860cd2b05bfacb4c7b7ca9baa9163592106
 RMD160 (phylip-3.61.tar.gz) = c783f947f204a653d9d5ed8e54e93368c46513de
 Size (phylip-3.61.tar.gz) = 835969 bytes
-SHA1 (patch-aa) = c92bef99d88552d46a72ca8b2a4c8abb246537cd
+SHA1 (patch-aa) = 268469d311183447d86db0274f0fd5079c6b16d6
diff -r 280b7460d4b3 -r a762680a4bec biology/phylip/patches/patch-aa
--- a/biology/phylip/patches/patch-aa   Wed Dec 28 13:19:26 2005 +0000
+++ b/biology/phylip/patches/patch-aa   Wed Dec 28 13:46:07 2005 +0000
@@ -1,13 +1,31 @@
-$NetBSD: patch-aa,v 1.1 2004/08/16 23:58:35 ben Exp $
+$NetBSD: patch-aa,v 1.2 2005/12/28 13:46:07 joerg Exp $
 
---- Makefile.orig      2004-08-15 12:23:29.000000000 +0200
-+++ Makefile   2004-08-15 12:24:04.000000000 +0200
-@@ -111,7 +111,7 @@
+--- Makefile.orig      2003-12-23 05:21:14.000000000 +0000
++++ Makefile
+@@ -62,7 +62,7 @@ EXEDIR  = ../exe
+ #
+ #
+ #A minimal one
+-CFLAGS =
++#CFLAGS =
+ #
+ # A basic one for debugging
+ #CFLAGS  = -g 
+@@ -111,7 +111,7 @@ LIBS    = -lm
  #
  # For gcc for Linux with X windows development packages installed
  # or for MacOS X with X windows installed
 -DLIBS= -L/usr/X11R6/lib/ -lX11 -lXaw -lXt
-+DLIBS= -L/usr/X11R6/lib/ -Wl,-rpath,/usr/X11R6/lib -lX11 -lXaw -lXt
++DLIBS= ${X11_LDFLAGS} -lX11 -lXaw -lXt
  #
  # ----------------------------------------------------------------------------
  #
+@@ -119,7 +119,7 @@ DLIBS= -L/usr/X11R6/lib/ -lX11 -lXaw -lX
+ # ordinary compiles and the tree-drawing programs, CC and DC
+ #
+ # This one specifies the "cc" C compiler
+-CC        = cc $(CFLAGS)
++CC        := ${CC} $(CFLAGS)
+ #
+ #  To use GCC instead, if it is not the compiler that "cc" invokes
+ #CC        = gcc $(CFLAGS)